• Reference :1

    Altschul, S.F., Gish, W., Mille, R.W., Myers, E.W., Lipman, D.J. 1990. Basic local alignment search tool. Journal of Molecular Biology 215(3), 403–410.

    Altschul, S.F., Madden, T.L., Schaffer, A.A., Zhang, J., Zhang, Z., Miller, W., Lipman, D.J., 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Research 25, 3389–3402

    Asare, P.A., Galyuon, I.K.A., Sarfo, J.K., Tetteh, J.P., 2011. Morphological and molecular based diversity studies of some cassava (Manihot esculenta Crantz.) germplasm in Ghana. African Journal of Biotechnology 10(63), 13900–13908. doi:http://dx.doi.org/10.5897/AJB11.929

    Asif, M., Ur-Rahman, M., Yusuf, Z., 2006. Genotyping analysis of six maize (Zea mays L.) hybrids using DNA fingerprinting technology. Pakistan Journal of Botany 38(5), 1425–1430.

    Azhar, M.T., Amin, I., Bashir, A., Mansoor, S., 2011. Characterization of resistance gene analogs from Gossypium arboretum and their evolutionary relationships with homologs from tetraploid cottons. Euphytica 178(3), 351–362. doi:10.1007/s10681-010-0310-0

    Benesi, I.R.M., Labuschagne, M.T., Herselman, L., Mahungu, N., 2010. Ethnobotany, morphology and genotyping of cassava germplasm from Malawi. Journal of Biological Sciences 10, 616–623. doi: 10.3923/jbs.2010.616.623.

    Bent, A.F., 1996. Plant disease resistance genes: Function meets structure. The Plant Cell 8(10), 1757–1771. doi:10.1105/tpc.8.10.1757

    Bombarely, A., Menda, N., Tecle, I.Y., Buels, R.M., Strickler, S., Fischer-York, T., Pujar, A., Leto, J., Gossalin, J., Mueller, L.A. 2011. The Sol Genomics Network (solgenomics.net): growing tomatoes using Perl. Nucleic Acids Research 39(1), D1149-D1155. doi: https://doi.org/10.1093/nar/gkq866.

    Bora, A., Choudhury, P.R., Pande, V., Mandal, A.B., 2016. Assessment of genetic purity in rice (Oryza sativa L.) hybrids using microsatellite markers. 3 Biotech 6(1), 50. doi:10.1007/s13205-015-0337-y.

    Burns. A., Gleadow, R., Cliff, J., Zacarias, A., Cavagnaro, T. 2010. Cassava: The Drought, War and Famine Crop in a Changing World. Sustainability 2, 3572–3607. doi: 10.3390/su2113572

    Chen, G., Pan, D., Zhou, Y., Lin, S., Ke, X., 2007. Diversity and evolutionary relationship of nucleotide binding site encoding disease resistance gene analogues in sweet potato (Ipomoea batatas Lam.). Journal of Bioscience 32, 713–721.

    Dangl, J.L., Jones, J.D.G., 2001. Plant pathogens and integrated defence responses to infection. Nature 411(6839), 826–833. doi: 10.1038/35081161

    Doyle, J.J., Doyle, J.L., 1990. Isolation of plant DNA from fresh tissue. Focus 12, 13–15.

    Duputie A., Massol, F., David, P., Haxaire, C., McKey, D., 2009. Traditional Amerindian cultivators combine directional and ideotypic selection for sustainable management of cassava genetic diversity. Journal of Evolutionary Biology 22(6), 1317–1325. doi: 10.1111/j.1420-9101.2009.01749.x.

    FAOSTAT, 2014. Food and Agricultural Commodities Production. Available online: http://faostat.fao.org.

    FAOSTAT, 2017. Food and Agricultural Commodities Production. Available online: http://faostat.fao.org.

    Fukuda, W.M.G., Guevara, C.L., Kawuki, R., Ferguson, M.E., 2010. Selected morphological and agronomic descriptors for the characterization of cassava. International Institute of Tropical Agriculture (IITA), Ibadan, Nigeria 19.

    Gomez, S.M., Denwar, N.N., Ramasubramanian, T., Simpson, C.E., Burow, G., Burke, J.J., Puppala, N., 2008. Identification of peanut hybrids using microsatellite markers and horizontal polyacrylamide gel electrophoresis. Peanut Science 35(2), 123–129. doi: http://dx.doi.org/10.3146/PS07-109.1.

    Goodstein, D.M., Shu, S., Howson, R., Neupane, R., Hayes, R.D., Fazo, J., Mitros, T., Dirks, W., Hellsten, U., Putnam, N., Rokhsar, D.S., 2012. Phytozome: A comparative platform for green plant genomics. Nucleic Acid Research 40, D1178-D1186. Doi: 10.1093/nar.gkr944. 

    Hahn, S.K., Terry, E.R., Leuschner, K., 1980. Breeding Cassava for resistance to cassava mosaic disease. Euphytica 29(3), 673-683. doi:10.1007/BF00023215

    Hammond-Kosack, K.E., Jones, J.D.G., 1997. Plant disease resistance genes. Annual Review Plant Physiology and Plant Molecular Biology 48, 575–607. Doi: 10.1146/annurev.arplant.48.1.575

    Jennifer, L.M.S., Tessa, M.B.S., Savithramma, P.D.K., 2005. Mechanism of plant resistance to virus. Nature Reviews 3, 789–798.

    Jones, J.D.G., Dangl, J.L., 2006. The plant immune system. Nature 444(7117), 323-329. doi: 10.1038/nature05286

    Legg, J.P., Fauquet, C.M., 2004. Cassava mosaic geminiviruses in Africa. Plant Molecular Biology 56(4), 585–599. doi:10.1007/s11103-004-1651-7.

    Lozano, R., Hamblin, M.T., Prochnik, S., Jannink, J.L., 2015. Identification and distribution of the NBS-LRR gene family in the Cassava genome. BMC Genomics 16, 360. doi: 10.1186/s12864-015-1554-9.

    Marone, D., Russo, M.A., Laido, G., De Leonardis, A.M., Mastrangelo, A.M., 2013. Plant Nucleotide binding site-Leucine-Rich Repeat (NBS-LRR) genes: active guardians in host defense responses. International Journal of Molecular Science 14(4), 7302–26. Doi: 10.3390/ijms14047302.

    Mbanjo, E.G.N., Tchoumbougnang, F., Mouelle, A.S., Oben, J.E., Nyine, M., Dochez, C., Ferguson, M.E., Lorenzen, J. 2012. Development of expressed sequence tags-simple sequence repeats (EST-SSRs) for Musa and their applicability in authentication of a Musa breeding population. African Journal of Biotechology 11(71), 13546-13559. doi: 10.5897/AJB12.972

    Mohan, C., Shanmugasundaram, P., Senthil, N., 2013. Identification of true hybrid progenies in cassava using simple sequence repeat (SSR) markers. Bangladesh Journal of Botany 42(1), 155–159. Doi: http://dx.doi.org/10.3329/bjb.v42i1.15906

    Naresh, V., Yamini, K.N., Rajendrakumar, P., Dinesh Kumar, V., 2009. EST-SSR marker-based assay for the genetic purity assessment of safflower hybrids. Euphytica 170(3), 347-353. doi:10.1007/s10681-009-9995-3.

    Otti, G., Fakoya, A., Andrew, I., Gedil, M., 2011. Development of genomic tools for verification of hybrids and selfed progenies in cassava (Manihot esculenta). African Journal of Biotechnology 10(76), 17400–17408. Doi: 10.5897/AJB11.1946.

    Raghu, D., Senthil, N., Saraswathi, T., Raveendran, M., Gnanam, R., Venkatachalam, R., Shanmugasundaram, P., Mohan, C., 2007. Morphological and simple sequence repeats (SSR) based finger printing of South Indian cassava germplasm. International Journal of Integrative Biology 1, 141–148.

    Rimoldi, F., Vidigal Filho, P.S., Kvitschal, M.V., Goncalves-Vidigal, M.C., Prioli, A.J., Prioli, S.M.A.P., Costa, T.R., 2010. Genetic divergence in sweet cassava cultivars using morphological agronomic traits and RAPD Molecular markers. Brazilian Archives of Biology and Technology 53, 1477–1486. Doi: 10.1590/S1516-89132010000600025.

    Salgado, K.C.P.C., Vieira, M.D.G.G.C., Pinho, E.V.R.V., Guimaraes, C.T., Pinho, R.G.V., Sousa, R.G.V., 2006. Genetic purity certificate in seeds of hybrid maize using molecular markers. Brazilian Journal of Seeds 28(1), 169–175

    Sambatti, J.B.M., Martins, P.S., Ando, A., 2001. Folk taxonomy and evolutionary dynamics of cassava: a case study in Ubatuba, Brazil. Economic Botany 55, 93–105. Doi: 10.1007/BF02864549

    Selvakumar, P., Ravikesavan, R., Gopikrishnan, A., Thiyagu, K., Preetha, S., Manikanda, B.N., 2010. Genetic purity analysis of cotton (Gossypium spp.) hybrids using SSR markers. Seed Science and Technology 38, 358–366.

    Semagn, K., Beyene, Y., Makumbi, D., Mugo, S., Prasanna, B.M., Magorokosho, C., Atlin, G., 2012. Quality control genotyping for assessment of genetic identity and purity in diverse tropical maize inbred lines. Theoretical and Applied Genetics 125(7), 1487–1501. Doi: 10.1007/s00122-012-1928-1

    Subashini, V., Shanmugapriya, A., Yasodha, R., 2014. Hybrid purity assessment in Eucalyptus F1 hybrids using microsatellite markers. 3Biotechnology 4(4), 367–373. doi:  10.1007/s13205-013-0161-1

    Sundaram, R.M., Naveenkumar, B., Biradar, S.K., Balachandran, S.M., Mishra, B., Ilyasahmed, M., Viraktamath, B.C.,Ramesha, M.S., Sarma, N.P., 2008. Identification of informative SSR markers capable of distinguishing hybrid rice parental lines and their utilization in seed purity assessment. Euphytica 163, 215-224. doi: 10.1007/s10681-007-9630-0

    Tamilkumar, P., Jerlin, R., Senthil, N., Ganeshan, K.N., Jeevan, R.J., Raveendran, M., 2009. Fingerprinting of rice hybrids and their parental lines using microsatellite markers and their utilization in genetic purity assessment of hybrid rice. Research Journal of Seed Science 3, 40-47. Doi: 10.3923/rjss.2009.40.47

    Tarr, D.E., Alexander, H.M., 2009. TIR-NBS-LRR genes are rare in monocots: evidence from diverse monocot orders. BMC Research Notes 2, 197. doi: 10.1186/1756-0500-2-197

    Vasquez, A., Lopez, C., 2012. Identification of polymorphisms in candidate resistance genes in cassava (Manihot esculenta Crantz). Acta Agronomica 61(2), 133–142.

    Wu, M., Jia, X., Tian, L., Lv, B., 2006. Rapid and reliable purity identification of F1 hybrids of Maize (Zea may L.) using SSR markers. Molecular Plant Breeding 4, 381–384.

    Yashitola, J., Thirumurugan, T., Sundaram, R.M., Naseerullah, M.K., Ramesha, M.S., Sarma, N.P., Sonti, R.V., 2002. Assessment of purity of rice hybrids using microsatellite and STS markers. Crop Science 42, 1369–1373.

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